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dsurvreg
Distributions available in survreg.
Description
Density, cumulative distribution function, quantile function and random generation for the set of distributions supported by the survreg
function.
Usage
dsurvreg(x, mean, scale=1, distribution='weibull', parms)
psurvreg(q, mean, scale=1, distribution='weibull', parms)
qsurvreg(p, mean, scale=1, distribution='weibull', parms)
rsurvreg(n, mean, scale=1, distribution='weibull', parms)
Arguments
x |
vector of quantiles. Missing values ( |
q |
vector of quantiles. Missing values ( |
p |
vector of probabilities. Missing values ( |
n |
number of random deviates to produce |
mean |
vector of linear predictors for the model. This is replicated to be the same length as |
scale |
vector of (positive) scale factors. This is replicated to be the same length as |
distribution |
character string giving the name of the distribution. This must be one of the elements of |
parms |
optional parameters, if any, of the distribution. For the t-distribution this is the degrees of freedom. |
Details
Elements of q
or p
that are missing will cause the corresponding elements of the result to be missing.
The location
and scale
values are as they would be for survreg
. The label "mean" was an unfortunate choice (made in mimicry of qnorm); since almost none of these distributions are symmetric it will not actually be a mean, but corresponds instead to the linear predictor of a fitted model. Translation to the usual parameterization found in a textbook is not always obvious. For example, the Weibull distribution is fit using the Extreme value distribution along with a log transformation. Letting F(t) = 1 - exp(-(at)^p) be the cumulative distribution of the Weibull using a standard parameterization in terms of a and p, the survreg location corresponds to -log(a) and the scale to 1/p (Kalbfleisch and Prentice, section 2.2.2).
Value
density (dsurvreg
), probability (psurvreg
), quantile (qsurvreg
), or for the requested distribution with mean and scale parameters mean
and sd
.
References
Kalbfleisch, J. D. and Prentice, R. L. (1970). The Statistical Analysis of Failure Time Data Wiley, New York.
See Also
Examples
# List of distributions available
names(survreg.distributions)
## Not run:
[1] "extreme" "logistic" "gaussian" "weibull" "exponential"
[6] "rayleigh" "loggaussian" "lognormal" "loglogistic" "t"
## End(Not run)
# Compare results
all.equal(dsurvreg(1:10, 2, 5, dist='lognormal'), dlnorm(1:10, 2, 5))
# Hazard function for a Weibull distribution
x <- seq(.1, 3, length=30)
haz <- dsurvreg(x, 2, 3)/ (1-psurvreg(x, 2, 3))
## Not run:
plot(x, haz, log='xy', ylab="Hazard") #line with slope (1/scale -1)
## End(Not run)
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Licensed under the GNU General Public License.